Reading an HLA DR by PCR Test Using the HLA Rosetta Stone

During the Biotoxin Illness Conference in October 2011, Dr. Gordon promised to provide  help to people trying to read HLA test results. In the video here, he talks with Annemieke Austin, MD about how you decode the results based on the Rosetta Stone that can be found in the books Surviving Mold and Mold Warriors.

The video from the weekend Biotoxin Illness conference is available for purchase. The cost for the full 5 disc set is $125, plus tax and shipping. Call (707) 575-5180 or email Justin to order.

The 5 DVD set Of Biotoxin Illness: the science behind accurate diagnosis and effective treatment includes the entire weekend, with both the public and the medical professional day’s information. The Power Point Slides are included in the DVD, overlaid during the talks, and as separate PDF documents for you to read through at your leisure. The talks and resources on this DVD set will provide necessary information to diagnose the problem, treat the layers of dysregulation of the immune system, and to manage the environment to protect against further exposure.

There is  a CD with the full set of Power Points as PDF, including slides that were not seen during the conference, a full Syllabus from the conference, and a list of PDF documents that Dr. Shoemaker has collected as supportive documentation of his work. Of special interest were the question and answer panels with Dr. Shoemaker and the Gordon Medical physicians, providing a range of physician experience.

Dr. Eric Gordon is the founder of  Gordon Medical Associates. What Dr. Gordon emphasizes is listening to his patients. “I believe my patients. Their description of what is going on in their body is the most accurate way we have to assess what is going on with them. I interpret the information they present, and blend it with laboratory results and imaging and other tests to determine a protocol that is customized to their condition.”

Annemieke Austin, MD views her role as both a medical detective and a physician with excitement. The challenge to discover the underlying cause of illness and the search for answers is a privilidge she approaches with great vigor.

Dysauntonomia, Biotoxins, and Lyme

Question:

I have a long term lyme patient who has recovered from most of her lyme symptoms with the exception of intermittent hypo tension 80/40 with  pulse in the 40′s known as autonomic insufficiency or pots or dysautonomia.  For years when she has a lyme flare she will experience strabismus.  I am convinced that ocular damage is from the lyme and is part of the etiology for her flares as well as the  dysautonomia. None the less researching this subject quickly makes one realize that it is complex with many suspected etiologies.  I have started her on florinef .1 mg for now.  So anyone have any other pearls of wisdom?  She has been on cortef for years low dose.  Her endocrinologist did not check with me and also put her on cortef so she got a 30 mg dose for a month or so, of course she felt great.   I have had her consult with a cardiologist, endocrinologist as well as neurologist.  They just kind of threw up their hands especially with a ” lyme dx” in the mixture.  I will consult next week again with her neurologist in an effort  to co-manage this case but may get left holding the bag as I usually do in  trying to treat lyme patients.   Anyway I would appreciate tips on treating this common problem with our lyme patients.

Dr. Eric GordonAnswer from Dr. Eric Gordon:

Have her check her VCS (visual  contrast sensitivity) at Surviving Mold at a time when n she is well and again when she is symptomatic.

Changes in the results may indicate exposure she may be having a mold exposure, or exposure to a multitude of antigens which are triggering her innate immune response ,  no longer self correcting since her Lyme disease caused dysregulation. It would be good to also check her C4a (Complement 4 anaphylatoxin), MMP-9 (Matrix metallopeptidase 9), VEGF (Vascular endothelial growth factor), TGF beta-1 (Transforming growth factor beta-1) when she is symptomatic. Run that group again when she is asymptomatic, and add VIP (Vasoactive intestinal polypeptide) and MSH (Alpha melanocyte stimulating hormone). You can find information about these tests at Lab Tests and information about how to order them, and where at Lab Orders.

This is Ritchie Shoemaker’s work and it can be confusing because it has lots of acronyms for uncommon and multifunctional immune modulators. There are other parts of his protocol but just the VCS online, and MMP-9, TGFbeta-1, and VIP (all of these from Labcorp) will let you know if further work up will be useful.

I have been using Dr Grubb’s protocols for dysautonomia for years, they are good band aids but don’t address the core problem. Ritchie’s protocols don’t work for every patient but they do help us better treat our “post Lyme” patients and a lot of the active Lyme patients who “herx”   yet never improve.

Ritchie will be presenting his latest work in Santa Rosa on Oct 22nd and 23rd, and we will be helping him to give people an explanation of the fundamental concepts and terminology he uses.

I have struggled for years to apply his approach. Like many original thinkers there are steps in his process that are like air to him, leaving the rest of us stumbling in the dark. We have worked with him to address this issue, so that he can better teach people how to really use his work. Dr. Neil Nathan from our offices will be at the conference with  a “Shoemaker for Dummies” talk to provide a foundation for understanding what Ritchie is doing. Other practitioners from our offices who also use Shoemaker protocols will be present to answer questions.

Learning to use Ritchie’s approach has improved the lives of many of my patients. Better understanding of persistent immune activation allows me to make better choices for my patients care.

The October 22-23 Biotoxin Illness conference, with Dr. Ritchie Shoemaker is open to the public on Saturday, the 22nd, and to medical professionals on both Saturday and Sunday, the 22-23rd. For more information, look HERE.

Dr. Eric Gordon is the founder of  Gordon Medical Associates. What Dr. Gordon emphasizes is listening to his patients. “I believe my patients. Their description of what is going on in their body is the most accurate way we have to assess what is going on with them. I interpret the information they present, and blend it with laboratory results and imaging and other tests to determine a protocol that is customized to their condition.”

Biotoxin Illness: Mold, CFIDS, Fibromyalgia, Lyme, and Inflammation – Ritchie Shoemaker MD and Neil Nathan MD

Holding Hands

You are invited to Gordon Medical’s next event,  a weekend seminar offered on October 22-23, 2011 in Santa Rosa, CA. Our speaker,  Ritchie Shoemaker MD, a well known mold and biotoxin illness expert, will be making a rare appearance in the Bay Area.  Both medical professionals and the interested public will find this weekend  filled with essential  information. You will learn to understand, diagnose, and treat biotoxin illnesses caused by mold, Lyme bacteria, and other triggers.  In addition to Dr. Shoemaker, Neil Nathan MD will guide you through the basics of biotoxin issues, and Alan McDaniel MD will address problems with mold and inflammation that are NOT biotoxin associated.

The first day, open to the public, will provide a solid foundation in the principles of how biotoxins damage the body, and what can be done about it. The second day, open to medical professionals only, will provide the tools necessary for practitioners to use these principles in their practice.

Saturday and Sunday October 22-23, 2011

Ritchie Shoemaker MD

Author of Surviving Mold and Mold Warriors

and Neil Nathan MD

Author of On Hope and Healing: For Those Who Have Fallen Through the Medical Cracks

and

Alan McDaniel MD speaking on Non IgE Mold Allergy and Inflammation

The Hyatt Vineyard Creek

Santa Rosa, CA

To learn more, to see the schedule for the talks, or to register, use the links  below.

Get more information

Register Now!

 If you have more questions, please call Gordon Medical Associates at the number listed below. You can also find more information about speakers at www.survivingmold.com and www.gordonmedical.com .

Thank you for your interest in our events! In the next year, we expect to continue to present cutting edge researchers and clinicians with exciting ideas on how to improve patient’s health.
Gordon Medical Associates
3471 Regional Parkway
Santa Rosa, CA 95403

(707) 575-5180

Will Surviving Mold Mean Surviving Lyme?

The following is the most recent article from Dr. Ritchie Shoemaker, a specialist in biotoxin caused illness. This article was originally published in Public Health Alert, and is republished here with the permission of Dr. Shoemaker. Plans are under way to bring Dr. Shoemaker to the San Francisco Bay Area in October of 2011 to speak with professionals and the public. If you are interested in attending events offered at that time, please contact us at Putting Lyme Behind You.

NOTES FROM THE MOLD FRONTIER

Ritchie C. Shoemaker MD
With Laura Mark, MD

Will Surviving Mold Mean Surviving Lyme?

 Take out a microscope and look under the in the kitchen cabinet right underneath the pinhole leak in the water supply line.  Is there something growing in the water-damaged area?  You bet: You’ll surely see some filamentous fungi (AKA molds), but look too at the bacteria and actinomycetes.  They are feasting on the simple food stuffs created by the extracellular digestive enzymes of the fungi.  Free food!  This habitat is a nice warm 65-72 degrees all day, every day, year round.  Microbe paradise!  Plenty of food, plenty of moisture and plenty of places to breed safely means plenty of microbial growth and plenty of secondary products of microbial metabolism.  Call the products toxins, inflammagens, cell wall fragments and beta glucans; they are all foreign antigens as far as our immune response is concerned.  And they all cause intense inflammatory responses that are well-demonstrated in tests of innate immunity.

If you put those compounds in the nose or lung of someone with “increased susceptibility,” you will see innate immune functions going nuts trying to defend against the invasion of these foreign antigens.  The excessive host inflammatory response can become the enemy if levels of melanocyte stimulating hormone (MSH) are low or if there is a particular collection of immune response genes present.  As it turns out about 25% of the general population have these specific immune response genes (HLA DR).

Water DamageAdd to this example of health hazards created by a leaky pipe some other sources of water intrusion that beget microbial growth like musty basements, crawlspaces with sagging flexible duct work, leaky roofs and slid-shod construction in schools, homes and workplaces.  You will see why in 2011 NIOSH says that 50% of our buildings in the US are water-damaged.

Do you think that people with chronic illnesses are helped by being subjected to inflammatory stressors from within?  No, they aren’t.  Don’t forget, those chronic illnesses are altered in presentation and therapy by such exposure to toxigenic microbes.

This entire mold problem hasn’t gone unnoticed.  There are numerous reports from US agencies (some are just downright deceptive, however, don’t believe it when you hear that mold is a nice warm fuzzy co-habitant that doesn’t make people sick unless they eat it), the Government Accountability Office and the World Health Organization all describe how moldy buildings sicken people.  There are hundreds of academic papers published showing the diversity and intensity of the inflammatory responses found in people sickened by exposure to the interior environment of water-damaged buildings (WDB) even without other illnesses. We have accurate diagnostic tests and our meticulous research has defined the abnormal physiology carefully. Such delineation led to published treatments that detail the step by step protocols used successfully by our group (and countless others) in thousands of patients.  We aren’t done; these illnesses continually show us that there is still much to learn.

Paralleling the march of science in the “mold” community has been a similar call in the Lyme community: to (1) establish better diagnostic tests, (2) identify accurate physiologic markers that define the illness; and then, (3) publish case control data on protocols (not anecdotes!) that work.  We have these three defining parameters in the mold world but they are not yet in the world of Lyme.  Indeed, some practitioners who focus on Lyme still don’t acknowledge the devastating effect of exposure to the interior environment of WDB has on their patients.  Lyme isn’t just Lyme when a patient is moldy too.  And to secure the diagnosis of Lyme, the illness must pass intact and unchallenged through the sieve of all other CIRS, including mold.

Mold illness is essentially identical to Lyme in symptoms and chronicity.  This observation is critical to understanding why some Lyme patients just don’t get better with antibiotics.  There can be no “clinical diagnosis” of Lyme simply based on the geography at the time of onset of illness or symptoms until mold has been considered and ruled out by careful environmental evaluation and sampling that includes DNA sampling.  Mold illness doesn’t get better with antibiotics.

Maybe some perspective will help bring understanding to treatment of the many patients suffering needlessly who are taking antibiotics for Lyme that haven’t worked.  The answers start with genetics, move on to loss of regulation of inflammation and then to the effects of unregulated inflammation (including silent colonization by commensal bacteria living in biofilms). Finally, correction of T regulatory cell (T regs) abnormalities must occur before return to normal health can be claimed. In the end, if the inflammatory elements that are invariably abnormal in Lyme and mold, specifically C4a, TGF beta-1 and MMP9, aren’t identified and corrected the patients won’t get better.  Said bluntly: If these parameters aren’t improving with a given therapy, the therapy isn’t correct.  Clearly, what many physicians who treat mold illness use for therapy has direct application to the management of illnesses collectively called Post-Lyme Syndrome.

The reader may find complete discussions and up to date information on mold illness at www.survivingmold.com and by reading Surviving Mold: Life in the Era of Dangerous Buildings, by Ritchie C. Shoemaker MD, published 12/2010. Another useful resource is the peer-reviewed consensus statement, “The Expert Mold Treating Physicians Report,” hosted by Policyholders of America (see www.survivingmold.com or www.policyholdersofamerica.com) and published in 7/2010.  This consensus statement has the most compete set of references of any of the current mold reports.  Additional information is found at www.globalindoorhealthnetwork.com.

So what is “Mold Illness?”

Long answer: The acute and chronic health conditions caused by exposure to the interior environment of a building with a history of, or ongoing, water intrusion in which there is amplified growth of microbes, including but not limited to fungi, bacteria, mycobacteria and actinomycetes; and presence of inflammagens in air and dust, including but not limited to beta-glucans, endotoxins, mycotoxins, mannans, proteinases, hemolysins, microbial volatile organic compounds (mVOCs) and spirocyclic drimanes.  The illness is readily identified by a combination of health symptoms, visual contrast sensitivity (VCS) deficits and abnormalities shown in blood tests performed by high complexity, CLIA-approved laboratories.  These tests are eligible for insurance coverage and are all available to practicing physicians (see  the laboratory section).

Short answer: this is an incredibly common Chronic Inflammatory Response Syndrome from Water-Damaged Buildings (CIRS-WDB).  The lesson for the Lyme community is that Post-Lyme is a CIRS too.

The US Government Accountability Office (US GAO) conducted and published its own review of governmental agency efforts to look at CIRS-WDB.  What they found wasn’t pretty:  no rigorous science, no coordination of research efforts and no involvement sought by agencies of people who actually treated the illness.  At least the GAO provided an overview of the inflammatory basis of the illness and a case definition.  That definition superseded the one published by our group in 2003.  The GAO looked for three elements: (1) similarity of symptoms of a given individual to those published (see roster of symptoms in Table 1) and a (2) similarity of lab abnormalities seen in published studies involving experimental animals and people (see roster of lab abnormalities in Table 2).  Finally, the (3) GAO wanted to see improvement with treatments.  The GAO reserved special criticism for a paper published in 2006 from the American Academy of Allergy, Asthma and Immunology (AAAAI) that is routinely used by defense interests in mold litigation.

In July 2009, the World Health Organization (WHO) weighed in with a far more comprehensive assessment of the inflammatory basis for mold illness, with recognition of the diverse potential sources of inflammation found inside WDB.

The mold world is dominated by litigation, with outcomes of personal injury cases resting on decisions made by judges across the country that have a marked diversity of interests in the science involved in mold illness.  The defense in these cases can only cite one or two papers that purport to show that mold illness can’t possibly exist, especially the 2002 (and now 2011) consensus statement from the American College of Occupational and Environmental Medicine (ACOEM).  This trivial contrivance has no data, no science and nothing even close to facts in it, and the newer version added no new information and no new references despite the passage of nine years (see ACOEM: Ploys and Lies), yet there it is at every mold case, portrayed as the best science in the world.  Unfortunately for the defense, however, the collusion and bastardization of science that underlies ACOEM was exposed by Dr. James Craner in 2008 and the Wall Street Journal in 1/2007 in an expose` written by David Armstrong.

These battles sound eerily similar to what goes on in the Lyme world: the basic battle of patients and their physicians versus entrenched university types with their numerous conflicts of interest goes on, though I haven’t heard of $22 million judgments against the deer and mouse community for fomenting tick borne disease like I see in construction defect mold cases.  Not surprisingly, the same strategies manipulated by Big Tobacco for years (see the Tobacco Legacy Library documents at UCSF) involved a tightly coordinated use of well paid physicians who would opine that cigarette smoking never hurt a fly.  In fact, the same docs who so often opine that mold won’t hurt a fly either are the same ones whose opinions were used by Big Tobacco to hide the truth about health risks associated with using tobacco.

Actually, few of the physicians involved with mold cases are “insurance company whores.” The research interests in the mold community are broad-based with good science being published constantly.  International meetings help researchers share peer-reviewed papers on a regular basis.  Physicians affiliated with our group, for example, use the same template to collate and share data in an organized fashion.

Until the Lyme community can attain the same research collaboration from treating physicians, with many clinicians involved in publishing peer-reviewed papers based on hard data and solid statistics, the argument against Post Lyme Syndrome will continue to be a one-sided battle of university physicians with academic reputations (and an agenda) versus anecdote (but also with their own agenda).  Organized data collection would end the arguments but even though I hear of attempts to bring such organization to the variety of Lyme docs out there, there is no position paper with authoritative references in favor of long-term antibiotics in Lyme patients not healed by three weeks of antibiotics. Even the studies of long-term antibiotics in Lyme don’t sort the benefit of antibiotics alone by HLA haplotype (see below for why this lack of recognition is a major oversight). I recently looked over some of the opinions I wrote in 1999 and 2000 for  Dr. Bransfield’s list serve about microbes and mental illness (mmi) calling for organized data collection; nothing has changed.  No organized data collection is ongoing that has led to publication of multiple data-driven papers.

So what is a CIRS-WDB? 

(And what implications does this entity hold for Post-Lyme patients?)

 The innate immune system directs inflammatory responses seen in both mold illness and Lyme disease.  The host defenses are constantly prepared for battle with foreign antigens.  Antigen detection is performed by specialized cell membrane-based receptors (Toll, c-linked lectin, dectin, mannose and many more) that when activated set off inflammatory responses characterized by release of pre-formed cytokines and complement.  Such inflammatory responses lead to differential gene activation and suppression such that the exact time course of acute exposure/illness acquisition can be identified as a sequence of activation of innate immune elements (SAIIE). These changes are easily seen in mold illness with re-exposure and in cyanobacterial illness (blue green algae syndromes), also with re-exposure.

The exact time course has been delineated by our published research.  What we see is complement activation with enhanced production of C4a on day 1; leptin rising on day 2 as cytokine responses block the activity of the leptin receptor in the hypothalamus creating temporary leptin resistance; MMP9 rising on day 2 to day 3 as endothelial cells are producing MMP14 from gene activation by cytokines and then MMP14 is cleaved to MMP9.  VEGF rises on day 1 as cytokine responses create capillary hypoperfusion, generating tissue hypoxia.  As VEGF rises, enhanced production of TGF beta-1 down-regulates VEGF, a well-documented feature of the day 3 labs.  Factor VIII, an acute phase reactant, falls on day 1, recovering to baseline by day 3.  Von Willebrand’s antigen and ristocetin associated co-factor fall by day 3, with such a nadir often associated with bleeding from lung or nose.  Interestingly, TGF beta-1 will rise later in day 1 and is well established by day 2.  TGF beta-1 will initially cause a rise of T regs. This rise is difficult to catch unless there are two blood draws on day 1, as by the time the blood is drawn on day 2 the T reg levels are falling (!) as they are bound in tissue with many apparently are being converted to pathogenic T cells.

I only have a few acute Lyme patients who waited three days to start antibiotics specifically so that they could participate in clinical care by testing our research models.  Their lab parameters demonstrated the exact same pattern as those seen in our mold patients, understanding that I have hundreds of mold patients recorded in acute exposure data sets.

The inflammatory response following antigen detection also activates immature dendritic cells (professional antigen-presenting cells) to then engulf (phagocytose) the antigen/receptor complex into a “bubble” inside the cell called an endosome.  This endosome, if acidified, will fuse with a lysosome where a specific molecule of HLA DR will be attached.  Further processing of the antigen/HLA complex occurs when the antigen complex is processed in the endoplasmic reticulum, finally leading to presentation of the finished antigen/HLA complex at the cell surface to a naïve T lymphocyte.  If there are no blocking cells, activation of the T cell leads to presentation of the HLA-labeled antigen to a B cell.  From then on, antibody production occurs.  (See Figure 1, the Biotoxin Pathway.)

Biotixin Pathway Figure 1

Click picture to download larger image

Here’s the bottom line of the findings that both mold and Lyme communities must acknowledge:  there are individual differences in response to Lyme and mold solely based on the immune response genes found on chromosome 6, HLA DR.  Specific haplotypes are associated with a marked increase in incidence in cases of mold illness and Post-Lyme patients.  The haplotypes overlap, with several being “multisusceptible,” and in that group there are two types that (while uncommon) are wildly over-represented in those with the worst clinical illness.  These are the “dreaded haplotypes,” of 11-3-52B and 4-3-53, with the subtypes of 0401, 0402 and 0404 being the worst of the 12 identified subtypes of 4-3-53.  Elegant research has shown why these HLA structures don’t do well in antigen presentation.

Data on HLA DR haplotypes in over 7000 patients confirm that there are six separate haplotypes conferring increased relative risk (incidence in cases divided by incidence in controls) for mold illness and four haplotypes for Post-Lyme.  For those with Lyme (don’t guess!) who don’t improve with antibiotics, expect to find one of these four haplotypes.  Similarly, in those who become ill following exposure to the interior environment of a WDB, expect to find one of the six mold susceptible haplotypes.  Understanding that essentially nothing in biology is guaranteed, there are some moldy patients without one of the six mold haplotypes and there are a few Post-Lyme people without one of the Lyme susceptible types.  In the general population, the incidence of these mold susceptible haplotypes is 25% and for Post-Lyme susceptible is 21%.

The key point here is that when a patient continues to experience illness symptoms and is shown to have genetic susceptibility, it is mandatory to understand that defective antigen presentation is ongoing and that production of a protective antibody (ies) is NOT happening.  The problem must then be re-defined- persistent antigen stimulation of production of cytokines, TGF-beta-1 and complement factors have become the illness, with all of the SAIIE activity ongoing.  Now that we know that there are inflammatory parameters that must be corrected in order for mold patients and Lyme patients alike to return to health, physicians and their patients need to be educated about fixing what is shown objectively to be wrong. Don’t guess!

 Differential diagnosis is never ending.

 Since the clinical diagnosis of Post Lyme and mold illness are the same, how can one say the illness is one or the other?  Without exposure, diagnosing neither illness would be supported, but with exposure, each illness could be present (and many times both are!).  What evidence could be used to convince a skeptic that mold illness could be present?

First, look for the moisture.  There are many sources of water intrusion commonly seen in construction, both brand new and old.  Crawl spaces and basements are the biggest offenders.  Look for water coming through concrete walls (block and poured concrete are porous wicks for water).  Check for in-ground water pressure against a subterranean wall, especially if the wall is at the bottom of a hill.  When you hear about a sump pump or dehumidifier being used in the basement look out: water intrusion already confirmed!  Musty smells should not be ignored.  “Dry” soils in crawlspaces are always releasing water through transpiration and evaporation:  that dry soil isn’t benign!  Whenever you see fiberglass ductwork in a crawlspace of basement, be very wary as it won’t be long before the joints between sections of those ducts loosen and permit entry of air full of bioaerosols made by the crawlspace microbes into the universal distributor, the HVAC system.  That means the “dry soils” in the crawlspace just contaminated the whole house.

Bathrooms surprisingly aren’t the common source of moisture most people think.  Sure pinhole leaks in plumbing will contaminate wall cavities but the black fungal growth you see on grout lines and along condensation areas of windows usually isn’t from the big-time illness causers.  Always test: never guess.

Common disasters from construction defects include lack of flashing around doors and windows, venting exhaust pipes into the attic, failure to seal around roof boots and over-flowing condensation pans. This isn’t an exhaustive list.

As it turns out, it makes no difference in determining the potential for exposure if we use DNA testing (ERMI, environmental relative mold index), observe mold growth or simply smell musty odors. Each of these indicators of impacted building health is correlated with human illness.  What ERMI does is to provide a clear indicator of what organisms are present, something that air sample never can do thoroughly, and that make-up of the fungi tells us what levels of water saturation are going to be found. That information in turn tells us where to look to (1) fix the moisture; (2) tear out the wet building materials and clean reservoirs in air, possession and floor/wall/ceiling.  Cleaning the reservoirs of microbial products is maddeningly demanding of attention to detail.

If one is considering a Lyme diagnosis, take a minute or two (that is all it takes) to ask the questions about water intrusion.  If you have a problem, and NIOSH says over 50% of US buildings do, then the illness might not be Lyme.  Or if Lyme really is there, it might be both Lyme and mold illness! Treating with antibiotics alone in the face of mold illness is illogical and potentially disastrous for the patient.

Tip-offs to presence of mold illness and not Lyme will be absence of elevated C3a at any time, especially after treatment for mold illness is completed.  C4a will be high in both illnesses as will TGF beta-1.  Sorting illness presentation by HLA DR is wonderfully instructive. When one sees a mis-match of HLA DR and illness, we need to re-consider the differential diagnosis. In fact, always challenge today’s diagnosis tomorrow.

Each step along the sequential path of therapy includes an assessment of outcome from what the prior intervention. Treatment should be transparent, logical and plodding with one step at a time the rule.  Repeated evaluations of the response to therapy help narrow the diagnostic process.  Please remember that a sudden worsening of illness or a recurrence of prior symptoms will usually mean re-exposure to a WDB or there might be a new colonization of a MRCoNS.

Genomics

We have entered the world of genomics testing.  This diagnostic advance, using microRNA and mRNA, has given a preliminary fingerprint to the genomic differences between controls and those with mold illness; between controls and Lyme patients defined before and after antibiotics; and between mold and Lyme.  The genomics of ciguatera has been established previously.  We are working on defining the role of commensals, such as biofilm-forming, methicillin resistant coagulase negative staphylococci (MRCoNS), as agents that influence genomic changes in affected hosts. We know that eradication of such organisms is absolutely mandatory as one of the steps in therapy for both mold illness and Lyme, but now we are seeing just why that observation is correct.  The future of this research is bright!

For those physicians interested in learning more about genomics, please contact the Surviving Mold website. Specialized testing tubes are used in phlebotomy for genomics assays; cost of these tubes is about $15 each.  After the tubes are filled with blood (we will provide instructions on specimen handling) and frozen the stabilized RNA can be analyzed electively.  The website also offers the new seven-hour instructional videos in mold illness and Lyme, as well as the Physicians’ Section where treating docs can share information, ask questions and comment on what they have seen in their practices.  The potential for cooperative interaction here is expanding rapidly, as new docs are being trained in protocols and collation of research data every day.  Learning how to use an evidence-based and sequentially organized approach to diagnose and treat biotoxin illnesses opens a world to improve the health and lives of our patients.

This brief discussion is just an overview of the research basis of modern mold illness practice.  Given the commonality of findings in mold illness and Lyme, clinicians need to consider if their data base is current.  If not, we truly hope they will ask what can be done to bring their practice into the exciting new era of management of CIRS.  Successful patient outcome depends on it.

We don’t have to guess any more about complex illnesses.  Use of physiologic and genomic parameters will bring order to the arguments that continue in the Lyme community, just as it has for mold illness.

Ritchie Shoemaker, M. D., is a recognized leader in patient care, research and education pioneer in the field of biotoxin related illness.  While illness acquired following exposure to the interior environment of water-damaged buildings (WDB) comprises the bulk of Shoemaker’s daily practice, other illnesses caused by exposure to biologically produced toxins are quite similar in their “final common pathway.”  What this means is that while the illness might begin acutely with exposure to fungi, spirochetes, apicomplexans, dinoflagellates and cyanobacteria, for example, in its chronic form, each of these illnesses has similar symptoms, lab findings and Visual Contrast Sensitivity findings.

Email Dr. Shoemaker

How Do You Know If You Really Have Lyme Disease?

Question:

Why do patient symptoms vary so much? Everyone seems to have different symptoms so how can we be sure we all have Lyme disease?

Dr. Neil NathanAnswer from Dr. Neil Nathan:

There is virtually no illness in which a specific disease manifests the exact same way in everyone who has that disease. For example, if a woman goes through menopause, she may experience primarily hot flashes or night  sweats, or she may have difficulty sleeping, or low energy, or mood swings, or depression, or vaginal dryness, or decreased libido, or difficulties with focus, memory, and concentration, or some combination of all of these.

Lyme disease is much more complicated than menopause, and it is not surprising that it can present in many different forms. It is so varied, in fact, that we often call it the “great masquerader.” And, of course, we are often not only dealing with the Lyme spirochete, Borrelia burgdorferi, but also with the the accompanying co-infections which include Bartonella, Babesia, Ehrlichia, and Mycoplasma. If that were not complicated enough, the weakened immune system produced by the Lyme infection(s) allows for other opportunistic infections which had been latent in the patient to show up as well, including Epstein-Barr virus, Cytomegalovirus, HHV6 (Human Herpes Virus 6), and Chlamydia pneumoniae, among others.

I hope this explains why symptoms vary so extensively. The second aspect to this question is even more difficult: how can we be sure that any individual truly has Lyme disease and all that entails? The most accurate answer is that certainty is very difficult to come by. Our tests are not as accurate as we would like, and we base a great deal of our treatment plan around how our patient responds to our presumed diagnosis and treatment. Improvement in our patients may take weeks or months to occur. This leaves us frequently uncertain about our decisions and choices, but hopeful that the choices were the right ones for that individual. It would be wonderful if we could bring a great deal more scientific analysis to the table, but at this moment we have to make do with what we have.

If an individual requires certainty to make these difficult choices, they may be faced with waiting a long time to decide on a treatment plan, and if that individual does have Lyme disease and associated co-infections, waiting is likely to lead to a significant progression of their illness.

Dr. Neil Nathan is a gifted physician who is passionate about healing. Since he loves to learn, he considers himself  “always a student’, and gets fired up about learning new approaches that might work for his patients. Never satisfied to just learn superficially, when something grabs Neil’s attention, he will research and study with the person who really KNOWS how to do it, so he can maximize its clinical benefits. He is the author of On Hope and Healing: For Those Who Have Fallen Through the Medical Cracks, and a contributor to  Insider Secrets For Treating Fibromyalgia: 12 Top Experts. You can find Dr. Nathan at Gordon Medical Associates in both Santa Rosa and Fort Bragg.

Coinfection Testing

Question:

Does Igenex Labs Test for coinfections?

Answered by Susan Friedl – Gordon Medical Research Coordinator:

Igenex Labs does test for many of the tick borne coinfections, including a variety of tests for Borrelia burgdorferi (Lyme disease), Babesia microti and Babesia duncani, Human Monocytic Ehrlichia and Anaplasma Phagocytophila, Bartonella henselae, and Rickettsia species (Rocky Mountain spotted fever, Mediterranean spotted fever, Boutonneuse fever, Israeli spotted fever, Astrakhan fever, Indian tick typhus, Murine typhus, Cat flea rickettsiosis, flea-borne typhus.)

Tests for each pathogen may be done by PCR, antibody, and in some cases, FISH. These tests are available individually, and as panels. Igenex has also recently added CD57 Natural Killer Cell testing.

Babesiosis is like malaria with the symptoms of acute disease being fever, chills, vomiting and fatigue.   It is usually self-limiting except in Lyme patients and those who have undergone splenectomy.   There are two forms of Ehrlichiosis:  Anaplasma phagocytophila (HGE)  and HME (Human Monocytic Ehrlichiosis).  HGE is primarily on the East coast, upper Midwest and California. HME is primarily in the Southeast, lower Midwest and Southwest, with cases reported in CA, NJ, NY, and WI.   These acute diseases may have symptoms of fever, chills, vomiting and fatigue and require prompt antibiotics.   Subclinical forms of these diseases may be present in patients with Lyme disease.

You can also send ticks to be tested for all of the above infections. This testing can be useful when you  find a tick attached, and you want to determine whether or not it could have passed any of these infections to you. It is estimated that up to 20% of the ticks with Lyme disease may have one of these other diseases.

While Igenex Labs tests many coinfections that can be found in patients with Lyme disease, there are other possible coinfections that they do NOT test for. Viral infections such as HHV-6, Epstein Barr Virus (EBV), and Cytomegalovirus (CMV) may not be problems in people with healthy immune systems, but may be a problems in those with compromised immunity. MycoplasmaChlamydia  and Helicobacter pylori infections may be found. Many chronically ill patients have problems with yeast and fungal infections. Some patients with chronic Lyme disease have tested positive for the new retrovirus, XMRV. Patients with Lyme disease can carry a wide variety of other infection, some of which are not treated by the antibiotics used for Lyme disease.

If you have symptoms that are not resolving on Lyme treatment, you should discuss with your practitioner whether you need further testing to see whether other infections  are involved in your case. Because Lyme disease can suppress your immune system, it can make you vulnerable to a variety of infections that might not otherwise be a health problem.

Susan Friedl has worked with Gordon Medical Associates in researching causes of, and treatments for the chronic illnesses our patients challenge us with. GMA is currently participating in the Stanford Lyme Study.

The goals are: (1) To systematically characterize different patterns of manifestations of Lyme Disease: a) in a large sample of patients seen in clinical practice who have been diagnosed with Lyme Disease for who we have retrospective medical record data; and b) in an additional sample of 100 patients diagnosed with Lyme Disease who will be recruited for the prospective phase of this research; and

(2) To evaluate and compare the sensitivity of various antibody and PCR assays against patients’ and comparison groups’ clinical diagnosis and symptom and illness patterns.  This research is inspired by considerations of the critical need for further research that recognizes the diverse manifestations of Lyme disease.

If you are a Gordon Medical patient interested in participating in this study, please contact Susan Friedl. If you are NOT a Gordon Medical patient, contact Dr. Cheryl Koopman.